C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aquaporin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581374 AQP4-003 ENSG00000171885 9606 - 18:26855817-26862848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENST00000581374
Transcript ID Heart Liver
ENST00000581374 0.462±0.00 0.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EQ CIL_0006EQ_0001 CGP 18:26454910-26865818
CIL_0006EP CIL_0006EP_0001 CGP 18:26852038-27185317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005372 TAS water transmembrane transporter activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006810 TAS:IEA transport
GO:0006833 TAS water transport
GO:0009897 IDA external side of plasma membrane
GO:0015250 EXP water channel activity
GO:0016020 IEA membrane
GO:0050891 IEP multicellular organismal water homeostasis
GO:0055085 TAS transmembrane transport
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079081 Aqp4-201 protein_coding Mus_musculus 0 1253

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