C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583752 CTD-2267D19.4-001 ENSG00000264655 9606 + 17:40367952-40368438 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000583752
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000583752 0.101±0.00 0.245±0.00 0.266±0.00 0.036±0.00 0.261±0.00 0.064±0.00 0.032±0.00 0.068±0.00 0.031±0.00 0.111±0.00 0.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0007HC CIL_0007HC_0001 CGP 17:40362931-40417950

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 582
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 571
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 558
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 542
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 540
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 532
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 531
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 488
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 4e-34 148

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