C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA binding protein, fox-1 homolog (C. elegans) 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000584778  |
RBFOX3-003 |
ENSG00000167281 |
9606 | - |
17:79094257-79508868  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002YN | CIL_0002YN_0001 | CGP | 17:79074939-79516148 |
| CIL_0002XY | CIL_0002XY_0001 | CGP | 17:79089345-79742222 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | IEA | RNA binding |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0043484 | IEA | regulation of RNA splicing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120061
|
Rbfox3-009 | protein_coding | Mus_musculus | 0 | 1295 |
|
ENSMUST00000106278
|
Rbfox3-008 | protein_coding | Mus_musculus | 0 | 1293 |
|
ENSMUST00000103023
|
Rbfox3-001 | protein_coding | Mus_musculus | 0 | 1293 |
|
ENSMUST00000017576
|
Rbfox3-002 | protein_coding | Mus_musculus | 0 | 1094 |
|
ENSMUST00000117731
|
Rbfox3-007 | protein_coding | Mus_musculus | 0 | 1014 |
|
ENSMUST00000136551
|
Rbfox3-004 | protein_coding | Mus_musculus | 0 | 730 |
|
ENSMUST00000154746
|
Rbfox3-010 | protein_coding | Mus_musculus | 0 | 723 |
|
ENSMUST00000069343
|
Rbfox3-003 | protein_coding | Mus_musculus | 0 | 640 |
|
ENSDART00000113140
|
rbfox3l-201 | protein_coding | Danio_rerio | 0 | 392 |
|
ENSDART00000146856
|
rbfox3l-002 | protein_coding | Danio_rerio | 3e-35 | 154 |
|
ENSDART00000132949
|
rbfox3l-001 | protein_coding | Danio_rerio | 3e-35 | 154 |
