C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002XY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167281-ENSG00000182156 CGP 9606 17:79089345-79742222
GeneTranscriptPositionBiotype
ENSG00000167281 (RBFOX3)
RNA binding protein, fox-1 homolog (C. elegans) 3 		ENST00000578887 (RBFOX3-001) 79233627-79424120 processed_transcript
ENST00000578998 (RBFOX3-005) 79090847-79100410 retained_intron
ENST00000580155 (RBFOX3-004) 79090816-79516148 protein_coding
ENST00000580508 (RBFOX3-009) 79115698-79183472 protein_coding
ENST00000581393 (RBFOX3-006) 79090816-79098508 retained_intron
ENST00000582043 (RBFOX3-007) 79090800-79235805 protein_coding
ENST00000582139 (RBFOX3-013) 79115703-79208556 protein_coding
ENST00000582344 (RBFOX3-012) 79298204-79307827 processed_transcript
ENST00000582880 (RBFOX3-011) 79091947-79096693 protein_coding
ENST00000582894 (RBFOX3-010) 79092380-79097726 protein_coding
ENST00000583458 (RBFOX3-002) 79089345-79482598 protein_coding
ENST00000584778 (RBFOX3-003) 79094257-79508868 protein_coding
ENSG00000182156 (ENPP7)
ectonucleotide pyrophosphatase/phosphodiesterase 7 		ENST00000328313 (ENPP7-001) 79730919-79742222 protein_coding
ENST00000576512 (ENPP7-002) 79735541-79739568 protein_coding
ENSG00000263278 (CH17-351M24.1)
 ENST00000571452 (CH17-351M24.1-001) 79598032-79603921 sense_intronic
ENST00000611949 (CH17-351M24.1-201) 79598618-79601292 sense_intronic
ENSG00000266711 (RP11-398J5.1)
 ENST00000583980 (RP11-398J5.1-001) 79132722-79136402 antisense
ENSG00000267719 (HP09025)
uncharacterized LOC100652929 		ENST00000592718 (HP09025-001) 79707266-79712317 lincRNA
CIL_0002XY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025576-ENSMUSG00000046697 CGP 10090 11:118489762-118992841
GeneTranscriptPositionBiotype
ENSMUSG00000025576 (Rbfox3)
RNA binding protein, fox-1 homolog (C. elegans) 3 		ENSMUST00000017576 (Rbfox3-002) 118491155-118909572 protein_coding
ENSMUST00000069343 (Rbfox3-003) 118491155-118911597 protein_coding
ENSMUST00000103023 (Rbfox3-001) 118489764-118761041 protein_coding
ENSMUST00000106278 (Rbfox3-008) 118491203-118909550 protein_coding
ENSMUST00000117731 (Rbfox3-007) 118489762-118909550 protein_coding
ENSMUST00000120061 (Rbfox3-009) 118491994-118909552 protein_coding
ENSMUST00000128863 (Rbfox3-005) 118811278-118888689 processed_transcript
ENSMUST00000134774 (Rbfox3-006) 118811280-118908005 processed_transcript
ENSMUST00000136551 (Rbfox3-004) 118502842-118569910 protein_coding
ENSMUST00000154746 (Rbfox3-010) 118496500-118507353 protein_coding
ENSMUSG00000046697 (Enpp7)
ectonucleotide pyrophosphatase/phosphodiesterase 7 		ENSMUST00000092373 (Enpp7-201) 118988188-118992841 protein_coding
ENSMUST00000106273 (Enpp7-001) 118988216-118992665 protein_coding
ENSMUSG00000084887 (Gm11749)
predicted gene 11749 		ENSMUST00000127327 (Gm11749-001) 118866257-118867220 sense_intronic
ENSMUSG00000085059 (Gm11750)
predicted gene 11750 		ENSMUST00000146016 (Gm11750-001) 118791372-118793828 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XY_0001ENSG00000167281ENST00000578887ENST00000578998ENST00000580155ENST00000580508ENST00000581393ENST00000582043ENST00000582139ENST00000582344ENST00000582880ENST00000582894ENST00000583458ENST00000584778ENSG00000182156ENST00000328313ENST00000576512ENSG00000263278ENST00000571452ENST00000611949ENSG00000266711ENST00000583980ENSG00000267719ENST00000592718CIL_0002XY_0002ENSMUSG00000025576ENSMUST00000017576ENSMUST00000069343ENSMUST00000103023ENSMUST00000106278ENSMUST00000117731ENSMUST00000120061ENSMUST00000128863ENSMUST00000134774ENSMUST00000136551ENSMUST00000154746ENSMUSG00000046697ENSMUST00000092373ENSMUST00000106273ENSMUSG00000084887ENSMUST00000127327ENSMUSG00000085059ENSMUST00000146016
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XY_0001ENSG00000167281ENST00000578887ENST00000578998ENST00000580155ENST00000582043ENST00000582880ENST00000583458ENSG00000182156ENST00000328313ENST00000576512ENSG00000263278ENST00000571452ENST00000611949ENSG00000266711ENST00000583980ENSG00000267719ENST00000592718CIL_0002XY_0002ENSMUSG00000025576ENSMUST00000017576ENSMUST00000069343ENSMUST00000103023ENSMUST00000106278ENSMUST00000117731ENSMUST00000120061ENSMUST00000136551ENSMUST00000154746ENSMUSG00000046697ENSMUST00000092373ENSMUST00000106273ENSMUSG00000084887ENSMUST00000127327ENSMUSG00000085059ENSMUST00000146016
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167281 ENST00000578887 0.109±0.00 0.442±0.00 N/A N/A 0.125±0.00 0.042±0.00 0.104±0.10 0.163±0.00 0.080±0.00 0.054±0.00 0.086±0.00 0.088±0.01 N/A N/A
ENST00000578998 0.045±0.00 N/A N/A N/A 0.097±0.00 0.047±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A
ENST00000580155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A
ENST00000580508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582043 N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A 2.708±0.00 N/A N/A 0.464±0.00 N/A N/A
ENST00000582139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 0.072±0.00 N/A
ENST00000582894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583458 N/A N/A 0.072±0.00 3.121±2.40 N/A 6.483±6.41 0.009±0.00 N/A N/A 0.200±0.00 0.033±0.00 0.198±0.16 0.176±0.00 1.853±0.51
ENST00000584778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182156 ENST00000328313 0.014±0.00 0.109±0.00 0.145±0.00 N/A N/A N/A N/A 0.623±0.22 2.271±0.00 0.034±0.00 N/A N/A 0.042±0.00 N/A
ENST00000576512 N/A 0.027±0.00 0.095±0.00 0.015±0.00 N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.091±0.00
ENSG00000263278 ENST00000571452 N/A N/A N/A 0.089±0.08 0.110±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A
ENST00000611949 N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266711 ENST00000583980 N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267719 ENST00000592718 0.076±0.00 0.499±0.00 N/A 0.232±0.00 0.226±0.00 0.124±0.03 0.069±0.04 0.086±0.04 0.073±0.00 0.169±0.00 0.025±0.00 0.113±0.04 0.021±0.01 0.233±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025576 ENSMUST00000017576 0.013±0.00 0.389±0.00 6.398±0.00 N/A N/A 0.083±0.02 0.008±0.00 0.032±0.02 0.024±0.00 N/A 0.021±0.00 0.103±0.04 N/A 0.026±0.00
ENSMUST00000069343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A
ENSMUST00000103023 0.014±0.00 N/A N/A N/A 0.078±0.02 0.059±0.00 0.017±0.00 0.070±0.05 0.080±0.03 0.137±0.00 0.010±0.00 0.229±0.11 0.127±0.00 0.032±0.00
ENSMUST00000106278 0.576±0.29 N/A N/A 2.958±0.00 0.020±0.00 0.140±0.01 N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.323±0.00
ENSMUST00000117731 0.435±0.00 0.511±0.06 8.757±2.87 23.551±26.86 N/A 0.098±0.02 N/A N/A 0.022±0.00 N/A N/A 0.176±0.09 0.104±0.00 N/A
ENSMUST00000120061 0.187±0.00 0.295±0.01 N/A 2.058±0.00 N/A 0.154±0.00 N/A 0.057±0.00 0.056±0.00 N/A N/A 0.174±0.05 N/A 0.268±0.00
ENSMUST00000128863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136551 N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154746 N/A N/A N/A 85.749±0.00 N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046697 ENSMUST00000092373 0.020±0.00 N/A 0.017±0.00 0.017±0.00 N/A 0.054±0.02 N/A N/A 0.004±0.00 0.114±0.00 N/A 0.139±0.09 4.313±0.00 0.049±0.01
ENSMUST00000106273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A 0.063±0.00
ENSMUSG00000084887 ENSMUST00000127327 N/A N/A 0.885±0.00 0.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.337±0.00 N/A
ENSMUSG00000085059 ENSMUST00000146016 N/A N/A 0.017±0.00 0.111±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.07

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