C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calponin 1, basic, smooth muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586059 CNN1-004 ENSG00000130176 9606 + 19:11539894-11547906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverMuscleTestisENST00000586059
Transcript ID Brain Breast Colon Heart Kidney Liver Muscle Testis
ENST00000586059 2.380±1.31 28.433±0.00 31.258±0.00 31.945±0.00 0.772±0.00 92.980±0.00 1.054±0.00 15.554±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000767 CIL_000767_0001 CGP 19:11505916-11550323
CIL_00076D CIL_00076D_0001 CGP 19:11538717-11559236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0031032 IEA actomyosin structure organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001384 Cnn1-201 protein_coding Mus_musculus 0 551

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