C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho family GTPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587250 RND2-001 ENSG00000108830 9606 + 17:43025241-43032036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587250
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587250 0.432±0.00 1.290±0.00 0.036±0.00 7.781±5.78 0.498±0.43 1.604±1.31 0.132±0.10 1.183±0.66 2.221±1.95 0.398±0.30 0.114±0.02 2.005±2.05 0.245±0.11 13.343±4.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061G CIL_00061G_0001 CGP 17:43014605-43032036
CIL_00061F CIL_00061F_0001 CGP 17:43025241-43125483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005769 IEA early endosome
GO:0006184 TAS:IEA GTP catabolic process
GO:0007165 TAS:IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0047485 IEA protein N-terminus binding
GO:0048672 IEA positive regulation of collateral sprouting

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001347 Rnd2-001 protein_coding Mus_musculus 0 1249
ENSMUST00000153185 Rnd2-002 processed_transcript Mus_musculus 0 998
ENSMUST00000134980 Rnd2-003 processed_transcript Mus_musculus 0 571

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