C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho family GTPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001347 Rnd2-001 ENSMUSG00000001313 10090 + 11:101468175-101471853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000001347
Transcript ID Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000001347 70.469±20.09 3.732±0.00 7.123±0.00 6.695±3.43 1.347±0.12 33.584±6.94 74.941±37.49 8.227±2.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063T CIL_00063T_0002 CGP 11:101448407-101466230
CIL_00061G CIL_00061G_0002 CGP 11:101458745-101471853
CIL_00061F CIL_00061F_0002 CGP 11:101464999-101551955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005769 IEA early endosome
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0047485 IEA protein N-terminus binding
GO:0048672 IMP positive regulation of collateral sprouting

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000587117 RND2-002 retained_intron Homo_sapiens 0 398
ENST00000587250 RND2-001 protein_coding Homo_sapiens 0 1249

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