C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, galactoside-binding, soluble, 3 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587251 LGALS3BP-002 ENSG00000108679 9606 - 17:78971331-78979923 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000587251
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000587251 2.986±0.00 2.889±0.00 8.075±0.00 9.634±3.75 40.958±0.00 13.446±0.00 4.195±0.00 3.772±0.00 5.060±0.00 25.707±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062K CIL_00062K_0001 CGP 17:78870910-78980109
CIL_0003UB CIL_0003UB_0002 CGP 17:78971238-79009867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141459 Lgals3bp-002 processed_transcript Mus_musculus 0 198
ENSMUST00000043722 Lgals3bp-001 protein_coding Mus_musculus 0 196
ENSMUST00000106290 Lgals3bp-005 protein_coding Mus_musculus 0 195

Loading