C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587313 RP11-773H22.2-001 ENSG00000267336 9606 + 18:12912844-12913906 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000587313
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000587313 0.021±0.00 0.412±0.00 0.149±0.00 0.468±0.00 0.019±0.00 0.019±0.00 0.073±0.00 0.047±0.00 0.112±0.00 0.116±0.07 0.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q0 CIL_0005Q0_0002 CGP 18:12661833-12929643
CIL_00068W CIL_00068W_0001 CGP 18:12785478-12987536

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168891 Eif4a2-201 protein_coding Mus_musculus 0 1155
ENSMUST00000147117 Eif4a2-005 nonsense_mediated_decay Mus_musculus 0 1155
ENSMUST00000131871 Eif4a2-006 nonsense_mediated_decay Mus_musculus 0 1142
ENSMUST00000115341 Eif4a2-014 protein_coding Mus_musculus 0 905
ENSMUST00000023599 Eif4a2-001 protein_coding Mus_musculus 0 905
ENSMUST00000130113 Eif4a2-008 retained_intron Mus_musculus 0 665
ENSMUST00000142031 Eif4a2-009 processed_transcript Mus_musculus 0 603
ENSMUST00000140017 Eif4a2-017 retained_intron Mus_musculus 0 409
ENSMUST00000152129 Eif4a2-011 retained_intron Mus_musculus 0 398
ENSMUST00000130483 Eif4a2-018 retained_intron Mus_musculus 0 394
ENSMUST00000187168 Eif4a2-202 protein_coding Mus_musculus 0 255
ENSMUST00000149328 Eif4a2-013 retained_intron Mus_musculus 0 255
ENSMUST00000123413 Eif4a2-003 nonsense_mediated_decay Mus_musculus 0 255
ENSMUST00000077605 Eif4a2-002 protein_coding Mus_musculus 0 255
ENSMUST00000141392 Eif4a2-012 retained_intron Mus_musculus 0 241
ENSMUST00000135020 Eif4a2-015 retained_intron Mus_musculus 0 239
ENSMUST00000130775 Eif4a2-007 retained_intron Mus_musculus 0 237
ENSMUST00000134816 Eif4a2-010 retained_intron Mus_musculus 3e-38 163

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