C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588032 TPM4-016 ENSG00000167460 9606 + 19:16088059-16102377 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLungMuscleOvaryPlacentaENST00000588032
Transcript ID Bladder Brain Breast Colon Lung Muscle Ovary Placenta
ENST00000588032 5.686±0.00 7.564±0.00 55.318±0.00 13.969±0.00 33.817±0.00 2.307±0.00 112.740±66.32 160.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IM CIL_0000IM_0001 CGP 19:16067021-16134234

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003575 Tpm4-001 protein_coding Mus_musculus 0 475

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