C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Niemann-Pick disease, type C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588867 NPC1-010 ENSG00000141458 9606 - 18:23531722-23535700 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WY CIL_0005WY_0001 CGP 18:23452823-23531807
CIL_0005WX CIL_0005WX_0001 CGP 18:23503470-23586898
CIL_0005WW CIL_0005WW_0001 CGP 18:23506184-23662885

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025279 Npc1-001 protein_coding Mus_musculus 8e-17 94
ENSMUST00000025276 3110002H16Rik-001 protein_coding Mus_musculus 8e-17 94
ENSMUST00000134756 3110002H16Rik-009 retained_intron Mus_musculus 3e-16 92
ENSMUST00000139151 3110002H16Rik-004 retained_intron Mus_musculus 3e-16 92
ENSMUST00000127123 3110002H16Rik-003 retained_intron Mus_musculus 3e-16 92

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