C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 253
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589717 ZNF253-001 ENSG00000256771 9606 + 19:19865905-19894674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000589717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000589717 0.514±0.00 0.470±0.00 0.785±0.00 0.678±0.30 0.604±0.21 0.587±0.39 0.348±0.12 1.306±0.15 0.669±0.53 1.331±0.00 0.282±0.03 0.472±0.07 0.326±0.11 0.452±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0001 CGP 19:19785839-19894674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS:IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 477
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 475
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 446
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 446
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 409
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 409
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 409
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 409
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 409
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 370
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 370
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0 364
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 355
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 355
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 353
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 353
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0 331
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 320
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 0 320
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 0 300
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 0 279
ENSMUST00000108007 Gm20939-201 protein_coding Mus_musculus 0 278
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 0 259
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 0 244
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 0 244
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 0 244
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 0 241
ENSMUST00000049705 Zfp457-201 protein_coding Mus_musculus 0 239
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0 231
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 0 224
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 0 224
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 0 222
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 0 222
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 0 222
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 0 222
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 0 222
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0 220
ENSMUST00000171257 Gm9894-201 protein_coding Mus_musculus 0 207
ENSMUST00000074295 Zfp942-201 protein_coding Mus_musculus 0 200
ENSMUST00000091879 Zfp942-001 protein_coding Mus_musculus 0 200
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 1.00053e-42 180
ENSMUST00000088763 Zfp946-002 protein_coding Mus_musculus 2e-40 172
ENSMUST00000120222 Zfp946-001 protein_coding Mus_musculus 2e-40 172
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 2e-39 169
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 2e-39 169
ENSMUST00000165705 Zfp583-201 protein_coding Mus_musculus 2e-39 169
ENSMUST00000108560 Zfp583-002 protein_coding Mus_musculus 2e-39 169
ENSMUST00000062765 Zfp583-001 protein_coding Mus_musculus 2e-39 169
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 8e-39 167
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 8e-39 167
ENSMUST00000166837 Gm17067-001 protein_coding Mus_musculus 3e-38 165
ENSMUST00000167740 Zfp946-201 protein_coding Mus_musculus 3e-38 165
ENSMUST00000110214 Gm6871-001 protein_coding Mus_musculus 4e-37 161
ENSMUST00000073410 Gm6871-005 protein_coding Mus_musculus 4e-37 161
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 2e-34 152
ENSMUST00000122051 Znf41-ps-001 unprocessed_pseudogene Mus_musculus 1e-32 147
ENSMUST00000105733 Gm13251-001 protein_coding Mus_musculus 1e-32 147
ENSMUST00000085664 Zfp433-201 protein_coding Mus_musculus 1e-31 143
ENSMUST00000084149 Gm13139-001 protein_coding Mus_musculus 5e-31 141
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 6e-30 137
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 6e-30 137
ENSMUST00000072829 Zfp936-201 protein_coding Mus_musculus 2e-29 135
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 8e-29 134
ENSMUST00000087654 Zfp763-001 protein_coding Mus_musculus 3e-28 132
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 4e-27 128
ENSMUST00000189452 Zfp119b-002 protein_coding Mus_musculus 1e-26 126
ENSMUST00000056147 Zfp119b-001 protein_coding Mus_musculus 1e-26 126
ENSMUST00000143639 Zfp932-005 protein_coding Mus_musculus 2e-24 119
ENSMUST00000125213 Zfp932-004 protein_coding Mus_musculus 2e-24 119
ENSMUST00000122407 Gm12591-001 unprocessed_pseudogene Mus_musculus 1e-21 110
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 5e-21 108
ENSMUST00000179175 Gm13247-201 protein_coding Mus_musculus 5e-21 108
ENSMUST00000105735 Gm13247-001 protein_coding Mus_musculus 5e-21 108
ENSMUST00000072427 Gm10033-201 protein_coding Mus_musculus 5e-21 108
ENSMUST00000080249 Zfp947-001 protein_coding Mus_musculus 2e-20 106
ENSMUST00000073201 Zfp958-201 protein_coding Mus_musculus 2e-20 106
ENSMUST00000173283 Gm7221-001 protein_coding Mus_musculus 2e-19 102
ENSMUST00000109916 Zfp442-001 protein_coding Mus_musculus 5e-16 92
ENSMUST00000163106 EU599041-201 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000073782 Zfp937-001 protein_coding Mus_musculus 0.000000000000006 88
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000154063 Zfp963-002 protein_coding Mus_musculus 0.0000000000003 82
ENSMUST00000130458 Zfp963-001 protein_coding Mus_musculus 0.0000000000003 82
ENSMUST00000149782 Gm20422-001 protein_coding Mus_musculus 0.0000000000003 82
ENSMUST00000034259 Zfp709-201 protein_coding Mus_musculus 0.000000000004 79
ENSMUST00000188685 Zfp709-001 protein_coding Mus_musculus 0.000000000004 79
ENSMUST00000185796 Zfp442-201 protein_coding Mus_musculus 0.00000000005 75
ENSMUST00000079642 Zfp119a-001 protein_coding Mus_musculus 0.0000000006 71
ENSMUST00000020628 Zfp354a-201 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000109119 Zfp354a-002 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000109122 Zfp354a-004 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000102766 Zfp354a-001 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000164677 Gm6871-003 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000180016 Zfp62-202 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000061757 Zfp62-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000136539 Zfp62-010 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000109197 Zfp62-008 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000109198 Zfp62-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000152036 3300002I08Rik-003 processed_transcript Mus_musculus 0.0000001 64
ENSMUST00000105313 Zfp873-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000107992 Gm5595-001 protein_coding Mus_musculus 0.0000004 62
ENSMUST00000107994 9830147E19Rik-001 processed_transcript Mus_musculus 0.0000004 62
ENSMUST00000107554 Zkscan16-001 protein_coding Mus_musculus 0.0000004 62
ENSDART00000128358 si:ch73-367f21.5-201 protein_coding Danio_rerio 0.0000004 62
ENSDART00000151336 si:ch73-367f21.5-001 protein_coding Danio_rerio 0.0000004 62
ENSDART00000112810 BX248128.3-202 protein_coding Danio_rerio 0.000001 60
ENSDART00000129267 BX248128.3-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000137775 CR356223.5-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000124296 zgc:171626-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000150868 zgc:171626-001 protein_coding Danio_rerio 0.000001 60
ENSDART00000121557 CABZ01024856.1-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000142456 si:ch211-152l15.4-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000150372 si:ch211-152l15.4-001 protein_coding Danio_rerio 0.000001 60
ENSDART00000147415 BX571760.3-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000128867 si:dkey-156k2.6-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000150403 si:dkey-156k2.6-001 protein_coding Danio_rerio 0.000001 60
ENSDART00000155466 si:ch211-234c11.1-201 protein_coding Danio_rerio 0.000001 60
ENSDART00000121915 si:ch211-234c11.1-002 protein_coding Danio_rerio 0.000001 60
ENSDART00000131561 si:dkey-16p19.3-201 protein_coding Danio_rerio 0.000001 60
ENSMUST00000081582 Zfp953-001 protein_coding Mus_musculus 0.00002 57
ENSDART00000130580 CABZ01036080.1-201 protein_coding Danio_rerio 0.00002 57
ENSMUST00000135798 Zfp933-002 protein_coding Mus_musculus 0.0002 53
ENSMUST00000105718 Zfp933-001 protein_coding Mus_musculus 0.0002 53

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