C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AFG3-like AAA ATPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590811 AFG3L2-002 ENSG00000141385 9606 - 18:12358704-12377002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000590811
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000590811 35.057±0.00 21.118±0.00 17.997±0.00 38.571±0.00 22.575±0.00 15.568±0.00 23.358±0.00 16.824±0.00 19.440±0.00 37.851±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0001 VISTA 18:11977697-12581651
CIL_00025T CIL_00025T_0002 CGP 18:12254319-12344320
CIL_0005DV CIL_0005DV_0001 CGP 18:12307669-12377314
CIL_0005DU CIL_0005DU_0001 CGP 18:12328944-12432238

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005524 IEA ATP binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025408 Afg3l2-201 protein_coding Mus_musculus 0 717

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