C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PSMC3 interacting protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000590931  |
PSMC3IP-005 |
ENSG00000131470 |
9606 | - |
17:42572962-42577795  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004GR | CIL_0004GR_0001 | CGP | 17:42561467-42573239 |
| CIL_00045X | CIL_00045X_0001 | CGP | 17:42567068-42577831 |
| CIL_00045R | CIL_00045R_0001 | CGP | 17:42572315-42610623 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0045892 | IEA | negative regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000126386
|
Psmc3ip-002 | retained_intron | Mus_musculus | 0 | 375 |
|
ENSMUST00000019447
|
Psmc3ip-001 | protein_coding | Mus_musculus | 0 | 375 |
|
ENSMUST00000142545
|
Psmc3ip-004 | nonsense_mediated_decay | Mus_musculus | 0 | 316 |
|
ENSMUST00000134520
|
Psmc3ip-003 | retained_intron | Mus_musculus | 0 | 316 |
