C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PSMC3 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590931 PSMC3IP-005 ENSG00000131470 9606 - 17:42572962-42577795 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GR CIL_0004GR_0001 CGP 17:42561467-42573239
CIL_00045X CIL_00045X_0001 CGP 17:42567068-42577831
CIL_00045R CIL_00045R_0001 CGP 17:42572315-42610623

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126386 Psmc3ip-002 retained_intron Mus_musculus 0 375
ENSMUST00000019447 Psmc3ip-001 protein_coding Mus_musculus 0 375
ENSMUST00000142545 Psmc3ip-004 nonsense_mediated_decay Mus_musculus 0 316
ENSMUST00000134520 Psmc3ip-003 retained_intron Mus_musculus 0 316

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