C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142545 Psmc3ip-004 ENSMUSG00000019303 10090 - 11:101092487-101095376 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000142545
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000142545 5.637±0.00 29.172±0.00 41.584±0.00 354.777±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GR CIL_0004GR_0002 CGP 11:101082565-101092207
CIL_00045X CIL_00045X_0002 CGP 11:101087277-101095436
CIL_00045R CIL_00045R_0002 CGP 11:101091823-101119893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246912 MLX-001 protein_coding Homo_sapiens 8e-18 97
ENST00000253789 PSMC3IP-001 protein_coding Homo_sapiens 0 289
ENST00000346833 MLX-003 protein_coding Homo_sapiens 7e-18 97
ENST00000393795 PSMC3IP-002 protein_coding Homo_sapiens 0 604
ENST00000435881 MLX-002 protein_coding Homo_sapiens 7e-18 97
ENST00000586337 PSMC3IP-011 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000587209 PSMC3IP-007 protein_coding Homo_sapiens 0 568
ENST00000588544 PSMC3IP-004 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000589505 PSMC3IP-003 retained_intron Homo_sapiens 0 318
ENST00000590050 MLX-004 retained_intron Homo_sapiens 8e-18 97
ENST00000590760 PSMC3IP-008 protein_coding Homo_sapiens 0 318
ENST00000590931 PSMC3IP-005 nonsense_mediated_decay Homo_sapiens 0 316

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