C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131470-ENSG00000141699 CGP 9606 17:42572315-42610623
GeneTranscriptPositionBiotype
ENSG00000131462 (TUBG1)
tubulin, gamma 1 		ENST00000251413 (TUBG1-001) 42609676-42615234 protein_coding
ENST00000588056 (TUBG1-003) 42609686-42612266 retained_intron
ENST00000589613 (TUBG1-002) 42609716-42611267 retained_intron
ENST00000589688 (TUBG1-005) 42609689-42615221 nonsense_mediated_decay
ENST00000591509 (TUBG1-004) 42609686-42613911 protein_coding
ENSG00000131470 (PSMC3IP)
PSMC3 interacting protein 		ENST00000253789 (PSMC3IP-001) 42572323-42577831 protein_coding
ENST00000393795 (PSMC3IP-002) 42572315-42577795 protein_coding
ENST00000586337 (PSMC3IP-011) 42572896-42577688 nonsense_mediated_decay
ENST00000587209 (PSMC3IP-007) 42572343-42577697 protein_coding
ENST00000587268 (PSMC3IP-010) 42576677-42577672 retained_intron
ENST00000588544 (PSMC3IP-004) 42572962-42577795 nonsense_mediated_decay
ENST00000589505 (PSMC3IP-003) 42572962-42577795 retained_intron
ENST00000590760 (PSMC3IP-008) 42572962-42577696 protein_coding
ENST00000590931 (PSMC3IP-005) 42572962-42577795 nonsense_mediated_decay
ENSG00000141699 (FAM134C)
family with sequence similarity 134, member C 		ENST00000309428 (FAM134C-001) 42579515-42609384 protein_coding
ENST00000585726 (FAM134C-008) 42585125-42609384 nonsense_mediated_decay
ENST00000585894 (FAM134C-002) 42581329-42610623 protein_coding
ENST00000586796 (FAM134C-009) 42587695-42609384 retained_intron
ENST00000586870 (FAM134C-004) 42581613-42609386 nonsense_mediated_decay
ENST00000588423 (FAM134C-005) 42586768-42610603 protein_coding
ENST00000589007 (FAM134C-011) 42582735-42586957 retained_intron
ENST00000589797 (FAM134C-003) 42579513-42609377 nonsense_mediated_decay
ENST00000590035 (FAM134C-012) 42585125-42586432 retained_intron
ENST00000590541 (FAM134C-007) 42592132-42609324 nonsense_mediated_decay
ENST00000591547 (FAM134C-006) 42585201-42610593 protein_coding
ENST00000593251 (FAM134C-010) 42585211-42609375 nonsense_mediated_decay
ENSG00000280183 (RP11-400F19.12)
 ENST00000623270 (RP11-400F19.12-001) 42598643-42599177 TEC
CIL_00045R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019303-ENSMUSG00000017802 CGP 10090 11:101091823-101119893
GeneTranscriptPositionBiotype
ENSMUSG00000017801 (Mlx)
MAX-like protein X 		ENSMUST00000017945 (Mlx-001) 101087300-101092207 protein_coding
ENSMUST00000107302 (Mlx-002) 101087277-101092207 protein_coding
ENSMUST00000107303 (Mlx-003) 101087277-101092207 protein_coding
ENSMUST00000143344 (Mlx-007) 101089662-101091518 processed_transcript
ENSMUST00000145187 (Mlx-005) 101087290-101091146 processed_transcript
ENSMUST00000149411 (Mlx-004) 101087290-101091126 processed_transcript
ENSMUST00000149597 (Mlx-006) 101087304-101088965 protein_coding
ENSMUSG00000017802 (Fam134c)
family with sequence similarity 134, member C 		ENSMUST00000017946 (Fam134c-001) 101096513-101119893 protein_coding
ENSMUST00000107295 (Fam134c-201) 101096322-101119843 protein_coding
ENSMUST00000142733 (Fam134c-003) 101098000-101119765 processed_transcript
ENSMUST00000147201 (Fam134c-004) 101098583-101119893 processed_transcript
ENSMUST00000154513 (Fam134c-002) 101096322-101119893 processed_transcript
ENSMUSG00000019303 (Psmc3ip)
proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein 		ENSMUST00000019447 (Psmc3ip-001) 101091823-101095436 protein_coding
ENSMUST00000126386 (Psmc3ip-002) 101092132-101095400 retained_intron
ENSMUST00000134520 (Psmc3ip-003) 101092157-101094160 retained_intron
ENSMUST00000142545 (Psmc3ip-004) 101092487-101095376 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045R_0001ENSG00000131462ENST00000251413ENST00000588056ENST00000589613ENST00000589688ENST00000591509ENSG00000131470ENST00000253789ENST00000393795ENST00000586337ENST00000587209ENST00000587268ENST00000588544ENST00000589505ENST00000590760ENST00000590931ENSG00000141699ENST00000309428ENST00000585726ENST00000585894ENST00000586796ENST00000586870ENST00000588423ENST00000589007ENST00000589797ENST00000590035ENST00000590541ENST00000591547ENST00000593251ENSG00000280183ENST00000623270CIL_00045R_0002ENSMUSG00000017801ENSMUST00000017945ENSMUST00000107302ENSMUST00000107303ENSMUST00000143344ENSMUST00000145187ENSMUST00000149411ENSMUST00000149597ENSMUSG00000017802ENSMUST00000017946ENSMUST00000107295ENSMUST00000142733ENSMUST00000147201ENSMUST00000154513ENSMUSG00000019303ENSMUST00000019447ENSMUST00000126386ENSMUST00000134520ENSMUST00000142545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045R_0001ENSG00000131462ENST00000251413ENST00000591509ENSG00000131470ENST00000253789ENST00000393795ENST00000586337ENST00000587209ENST00000590760ENSG00000141699ENST00000309428ENST00000585894ENST00000586870ENST00000589007ENSG00000280183ENST00000623270CIL_00045R_0002ENSMUSG00000017801ENSMUST00000017945ENSMUST00000107302ENSMUST00000143344ENSMUST00000149411ENSMUSG00000017802ENSMUST00000017946ENSMUST00000107295ENSMUST00000142733ENSMUST00000147201ENSMUSG00000019303ENSMUST00000019447ENSMUST00000126386ENSMUST00000142545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131462 ENST00000251413 13.620±0.00 14.974±0.00 3.451±0.00 13.726±4.09 16.801±0.00 5.242±1.78 8.304±5.93 22.373±0.00 6.652±3.28 8.138±5.47 24.481±19.65 22.190±7.06 21.818±4.44 108.998±0.70
ENST00000588056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.582±0.00 16.968±0.00 137.657±0.00
ENSG00000131470 ENST00000253789 N/A N/A N/A N/A 4.931±0.00 2.838±0.00 5.323±0.00 9.457±0.00 7.653±0.00 6.077±0.00 N/A N/A N/A N/A
ENST00000393795 N/A 9.027±0.00 N/A 1.828±0.00 4.964±0.00 3.949±0.00 5.335±0.00 N/A 2.652±1.40 3.997±0.00 18.803±0.00 6.512±3.55 5.674±2.31 11.637±1.40
ENST00000586337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.188±0.00
ENST00000587209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.370±0.00 2.822±0.00 6.154±0.00
ENST00000587268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.925±0.00
ENST00000590931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141699 ENST00000309428 12.331±0.00 16.906±0.00 N/A 9.294±0.00 6.358±5.15 1.837±0.00 2.457±0.00 4.621±2.81 3.038±0.58 2.284±0.00 10.600±0.00 10.584±4.33 9.295±1.76 14.131±1.42
ENST00000585726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585894 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A N/A N/A N/A
ENST00000586796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.644±0.00 N/A N/A N/A
ENST00000588423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589007 N/A N/A 9.960±0.00 N/A 10.866±0.00 N/A N/A 14.805±0.00 N/A 9.978±0.00 N/A N/A N/A N/A
ENST00000589797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280183 ENST00000623270 0.142±0.00 0.419±0.00 0.891±0.00 0.157±0.00 0.606±0.53 N/A 0.204±0.02 0.273±0.00 N/A N/A N/A 0.441±0.36 0.088±0.01 0.286±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017801 ENSMUST00000017945 2.692±0.30 7.583±1.07 3.184±0.18 N/A 3.637±0.41 9.908±0.76 1.215±0.27 2.851±0.52 3.045±0.75 2.346±0.34 0.994±0.16 2.887±0.80 3.285±0.76 N/A
ENSMUST00000107302 7.575±1.82 5.477±0.70 9.298±0.49 11.613±8.09 6.225±1.82 17.491±2.12 3.029±0.64 9.819±1.87 9.014±1.36 4.884±0.96 1.406±0.33 5.718±1.79 6.372±3.95 N/A
ENSMUST00000107303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143344 12.857±0.66 14.927±2.06 N/A 12.653±4.73 26.152±13.08 28.557±1.68 5.000±1.77 13.391±3.76 10.645±1.87 11.831±0.07 3.056±0.53 9.993±2.98 15.324±4.61 N/A
ENSMUST00000145187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149411 N/A N/A N/A 21.980±0.00 N/A N/A N/A N/A N/A N/A 2.962±0.29 22.220±7.70 22.627±15.25 N/A
ENSMUST00000149597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017802 ENSMUST00000017946 35.278±4.68 N/A 17.745±2.05 17.639±5.63 32.862±5.45 36.160±7.90 10.999±2.47 27.893±7.06 23.513±6.48 26.083±3.75 13.584±2.90 25.884±10.67 25.635±6.98 17.068±6.78
ENSMUST00000107295 N/A 28.163±5.16 N/A N/A 23.128±3.83 15.582±4.93 N/A N/A 7.463±2.24 N/A N/A 18.207±3.13 N/A N/A
ENSMUST00000142733 N/A 15.454±3.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.644±1.19
ENSMUST00000147201 N/A 22.245±2.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019303 ENSMUST00000019447 4.445±0.64 6.141±0.00 6.751±1.01 8.837±1.87 3.667±0.10 10.726±0.14 2.294±0.28 5.920±0.57 7.380±3.47 4.332±0.79 1.526±0.38 5.494±1.22 7.475±2.74 26.060±6.99
ENSMUST00000126386 N/A N/A N/A N/A N/A N/A N/A N/A 9.071±0.98 N/A N/A N/A N/A 23.758±9.87
ENSMUST00000134520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142545 N/A N/A N/A 5.637±0.00 N/A N/A N/A N/A N/A N/A N/A 29.172±0.00 41.584±0.00 354.777±0.00

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