C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019447 Psmc3ip-001 ENSMUSG00000019303 10090 - 11:101091823-101095436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019447 4.445±0.64 6.141±0.00 6.751±1.01 8.837±1.87 3.667±0.10 10.726±0.14 2.294±0.28 5.920±0.57 7.380±3.47 4.332±0.79 1.526±0.38 5.494±1.22 7.475±2.74 26.060±6.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GR CIL_0004GR_0002 CGP 11:101082565-101092207
CIL_00045X CIL_00045X_0002 CGP 11:101087277-101095436
CIL_00045R CIL_00045R_0002 CGP 11:101091823-101119893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006310 IEA DNA recombination
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0051321 IEA meiotic cell cycle
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246912 MLX-001 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000253789 PSMC3IP-001 protein_coding Homo_sapiens 0 350
ENST00000346833 MLX-003 protein_coding Homo_sapiens 0.00000000000001 86
ENST00000393795 PSMC3IP-002 protein_coding Homo_sapiens 0 800
ENST00000435881 MLX-002 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000586337 PSMC3IP-011 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000587209 PSMC3IP-007 protein_coding Homo_sapiens 0 725
ENST00000588544 PSMC3IP-004 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000589505 PSMC3IP-003 retained_intron Homo_sapiens 0 377
ENST00000590050 MLX-004 retained_intron Homo_sapiens 0.00000000000002 86
ENST00000590760 PSMC3IP-008 protein_coding Homo_sapiens 0 377
ENST00000590931 PSMC3IP-005 nonsense_mediated_decay Homo_sapiens 0 375

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