C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591146 HMGB2P1-001 ENSG00000267736 9606 + 19:1203209-1203842 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000591146
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000591146 0.022±0.00 0.024±0.00 0.024±0.00 0.024±0.00 0.082±0.06 0.024±0.00 0.022±0.00 0.094±0.04 0.020±0.00 0.248±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QW CIL_0000QW_0001 CGP 19:1107636-1228435
CIL_0005ZG CIL_0005ZG_0002 CGP 19:1177558-1238027

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067925 Hmgb2-201 protein_coding Mus_musculus 0 508
ENSMUST00000121816 Gm13232-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000122151 Gm13237-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000118554 Gm13167-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000119295 Gm14098-001 processed_pseudogene Mus_musculus 0 318

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