C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591234 ABCA5-007 ENSG00000154265 9606 - 17:69247145-69286261 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000591234
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000591234 2.078±0.35 0.922±0.00 0.902±0.00 1.246±0.00 6.276±0.00 2.082±1.11 5.679±0.00 3.479±1.74 0.595±0.32 7.468±2.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H0 CIL_0006H0_0001 CGP 17:69244311-69543331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043961 Abca5-001 protein_coding Mus_musculus 0 3018
ENSMUST00000124714 Abca5-002 protein_coding Mus_musculus 0 1513

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