C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol dehydrogenase 8 (all-trans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591589 RDH8-001 ENSG00000080511 9606 + 19:10013249-10022279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyOvaryTestisENST00000591589
Transcript ID Adrenal Breast Kidney Ovary Testis
ENST00000591589 0.025±0.00 0.138±0.00 0.508±0.00 0.016±0.00 0.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077H CIL_00077H_0002 CGP 19:9959561-10022279
CIL_0004G7 CIL_0004G7_0001 CGP 19:10013249-10093252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0004303 IEA estradiol 17-beta-dehydrogenase activity
GO:0004745 IEA retinol dehydrogenase activity
GO:0005737 IEA cytoplasm
GO:0005887 TAS integral component of plasma membrane
GO:0006694 TAS steroid biosynthetic process
GO:0006703 IEA estrogen biosynthetic process
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0042572 IEA retinol metabolic process
GO:0052650 IEA NADP-retinol dehydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066387 Rdh8-201 protein_coding Mus_musculus 0 802

Loading