C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591598 CTDP1-003 ENSG00000060069 9606 + 18:79680152-79754503 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLungMuscleOvaryPlacentaTestisENST00000591598
Transcript ID Adrenal Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000591598 2.076±0.00 0.645±0.00 0.872±0.00 0.781±0.00 1.511±0.00 2.945±0.00 3.210±0.00 7.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0015629 IDA actin cytoskeleton
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036229 Ctdp1-001 protein_coding Mus_musculus 0 822
ENSDART00000111517 ctdp1-201 protein_coding Danio_rerio 0 486
ENSDART00000148516 ctdp1-001 protein_coding Danio_rerio 0 486
ENSMUST00000161003 Ctdp1-003 protein_coding Mus_musculus 9e-33 147

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