C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, galactoside-binding, soluble, 3 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591778 LGALS3BP-007 ENSG00000108679 9606 - 17:78971238-78979918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000591778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000591778 16.030±0.00 12.609±0.00 7.282±0.00 4.977±0.00 25.470±18.03 21.846±1.21 13.774±0.00 16.288±0.00 9.224±2.93 4.945±0.00 1.760±0.00 50.768±40.79 81.617±30.07 17.101±7.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062K CIL_00062K_0001 CGP 17:78870910-78980109
CIL_0003UB CIL_0003UB_0002 CGP 17:78971238-79009867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043722 Lgals3bp-001 protein_coding Mus_musculus 0 268
ENSMUST00000106290 Lgals3bp-005 protein_coding Mus_musculus 0 267
ENSMUST00000141459 Lgals3bp-002 processed_transcript Mus_musculus 0 196

Loading