C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HCG2039718, isoform CRA_g {ECO:0000313|EMBL:EAW80179.1}; Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000466834}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593039 RAD51L3-RFFL-001 ENSG00000267618 9606 - 17:35011349-35121493 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055O CIL_00055O_0001 CGP 17:34980494-35089319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0008094 IEA DNA-dependent ATPase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071152 Rffl-201 protein_coding Mus_musculus 0 516
ENSMUST00000108173 Rffl-203 protein_coding Mus_musculus 0 516
ENSMUST00000093975 Rffl-202 protein_coding Mus_musculus 0 516
ENSMUST00000021036 Rffl-003 protein_coding Mus_musculus 0 516
ENSMUST00000074515 Rffl-001 protein_coding Mus_musculus 0 516
ENSMUST00000100718 Rad51d-006 nonsense_mediated_decay Mus_musculus 0 381
ENSMUST00000092844 Rad51d-003 protein_coding Mus_musculus 0 381
ENSMUST00000018985 Rad51d-001 protein_coding Mus_musculus 0 381
ENSMUST00000146053 Rad51d-002 nonsense_mediated_decay Mus_musculus 0 381
ENSMUST00000103218 Rffl-002 protein_coding Mus_musculus 0 302
ENSMUST00000135963 Rad51d-004 nonsense_mediated_decay Mus_musculus 9.94922e-44 182
ENSDART00000065132 protein_coding Danio_rerio 2e-36 158

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