C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD51 homolog D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092844 Rad51d-003 ENSMUSG00000018841 10090 - 11:82878737-82890589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonMuscleOvaryPlacentaTestisENSMUST00000092844
Transcript ID Adrenal Colon Muscle Ovary Placenta Testis
ENSMUST00000092844 3.934±0.30 2.543±0.07 0.905±0.06 5.201±0.90 2.249±1.22 3.373±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0002 CGP 11:82876434-82900801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0008094 IEA DNA-dependent ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335858 RAD51D-003 protein_coding Homo_sapiens 0 429
ENST00000345365 RAD51D-001 protein_coding Homo_sapiens 0 429
ENST00000394589 RAD51D-009 protein_coding Homo_sapiens 0 429
ENST00000460118 RAD51D-007 protein_coding Homo_sapiens 0 429
ENST00000586044 RAD51D-002 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000586210 RAD51D-008 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000587405 RAD51D-020 protein_coding Homo_sapiens 0 309
ENST00000587977 RAD51D-010 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000588372 RAD51D-004 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000588594 RAD51D-013 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000590016 RAD51D-012 protein_coding Homo_sapiens 0 429
ENST00000591723 RAD51L3-RFFL-003 protein_coding Homo_sapiens 0 475
ENST00000592181 RAD51L3-RFFL-002 protein_coding Homo_sapiens 0 381
ENST00000592577 RAD51D-022 protein_coding Homo_sapiens 0 285
ENST00000593039 RAD51L3-RFFL-001 protein_coding Homo_sapiens 0 381

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