C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family A (ABC1), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593153 ABCA5-003 ENSG00000154265 9606 - 17:69273971-69327182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000593153
Transcript ID Heart Muscle
ENST00000593153 1.391±0.08 4.190±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H0 CIL_0006H0_0001 CGP 17:69244311-69543331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124714 Abca5-002 protein_coding Mus_musculus 0 3051
ENSMUST00000043961 Abca5-001 protein_coding Mus_musculus 0 3051
ENSMUST00000127318 Abca5-005 retained_intron Mus_musculus 0 1168
ENSMUST00000134721 Abca5-004 protein_coding Mus_musculus 0 610
ENSMUST00000148984 Abca5-003 processed_transcript Mus_musculus 0 361

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