C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine/arginine repetitive matrix 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000593639  |
SRRM1-024 |
ENSG00000133226 |
9606 | + |
1:24641231-24649987  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZX | CIL_0007ZX_0001 | VISTA | 1:24547215-25148615 |
| CIL_0002GR | CIL_0002GR_0002 | CGP | 1:24631716-24844324 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006397 | IEA | mRNA processing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000131373
|
Srrm1-008 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000030613
|
Srrm1-002 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000136342
|
Srrm1-015 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000084846
|
Srrm1-001 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000105861
|
Srrm1-003 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000136409
|
Srrm1-006 | nonsense_mediated_decay | Mus_musculus | 0 | 335 |
|
ENSMUST00000134019
|
Srrm1-005 | processed_transcript | Mus_musculus | 0 | 333 |
|
ENSMUST00000134854
|
Srrm1-004 | retained_intron | Mus_musculus | 0 | 333 |
|
ENSMUST00000150619
|
Srrm1-007 | retained_intron | Mus_musculus | 0 | 333 |
