C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ryanodine receptor 1 (skeletal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594335 RYR1-002 ENSG00000196218 9606 + 19:38496215-38565228 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleTestisENST00000594335
Transcript ID Brain Heart Muscle Testis
ENST00000594335 0.232±0.00 0.033±0.00 117.992±0.00 2.742±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IEA calcium channel activity
GO:0016020 IEA membrane
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032813 Ryr1-201 protein_coding Mus_musculus 0 4368
ENSMUST00000179893 Ryr1-202 protein_coding Mus_musculus 0 4340
ENSDART00000036015 ryr1b-201 protein_coding Danio_rerio 0 1864
ENSDART00000147464 ryr3-001 protein_coding Danio_rerio 0 575
ENSDART00000149737 ryr2b-001 protein_coding Danio_rerio 0 444
ENSDART00000122570 protein_coding Danio_rerio 0 342

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