C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594984 TBC1D17-006 ENSG00000104946 9606 + 19:49882266-49888707 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyMuscleOvaryENST00000594984
Transcript ID Brain Colon Kidney Muscle Ovary
ENST00000594984 15.205±0.00 16.275±0.00 25.649±0.00 31.474±0.00 6.131±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047085 Tbc1d17-002 protein_coding Mus_musculus 0 1066
ENSMUST00000145959 Tbc1d17-001 nonsense_mediated_decay Mus_musculus 0 989
ENSMUST00000139947 Tbc1d17-003 retained_intron Mus_musculus 0 911
ENSMUST00000130081 Tbc1d17-004 retained_intron Mus_musculus 0 351

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