C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TBC1 domain family, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145959 Tbc1d17-001 ENSMUSG00000038520 10090 - 7:44841032-44849079 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000145959
Transcript ID Brain
ENSMUST00000145959 13.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LB CIL_0006LB_0002 CGP 7:44840901-44855421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221543 TBC1D17-001 protein_coding Homo_sapiens 0 1919
ENST00000535102 TBC1D17-003 protein_coding Homo_sapiens 0 1755
ENST00000594984 TBC1D17-006 nonsense_mediated_decay Homo_sapiens 0 989
ENST00000594996 TBC1D17-002 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000596243 TBC1D17-004 retained_intron Homo_sapiens 0 1700
ENST00000598789 TBC1D17-009 processed_transcript Homo_sapiens 0 453
ENST00000599049 TBC1D17-005 protein_coding Homo_sapiens 0 1404
ENST00000600354 TBC1D17-007 retained_intron Homo_sapiens 0 396
ENST00000622860 TBC1D17-201 protein_coding Homo_sapiens 0 1884

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