C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596243 TBC1D17-004 ENSG00000104946 9606 + 19:49878550-49888748 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryENST00000596243
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary
ENST00000596243 0.607±0.00 1.067±0.00 1.334±0.00 1.333±0.00 0.331±0.00 1.179±0.00 5.772±0.00 6.551±4.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047085 Tbc1d17-002 protein_coding Mus_musculus 0 1777
ENSMUST00000145959 Tbc1d17-001 nonsense_mediated_decay Mus_musculus 0 1700
ENSMUST00000139947 Tbc1d17-003 retained_intron Mus_musculus 0 1452
ENSMUST00000130081 Tbc1d17-004 retained_intron Mus_musculus 0 1109
ENSMUST00000153161 Tbc1d17-007 retained_intron Mus_musculus 0 464

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