C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 558
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597304 ZNF558-007 ENSG00000167785 9606 - 19:8810938-8825099 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungOvaryPlacentaENST00000597304
Transcript ID Bladder Brain Breast Colon Liver Lung Ovary Placenta
ENST00000597304 0.809±0.00 0.337±0.00 0.432±0.00 0.486±0.00 0.364±0.00 0.424±0.00 0.799±0.00 0.274±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UU CIL_0000UU_0001 CGP 19:8806170-8843340

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034647 Zfp558-003 protein_coding Mus_musculus 0 1038
ENSMUST00000159596 Zfp558-001 nonsense_mediated_decay Mus_musculus 0 375
ENSMUST00000079642 Zfp119a-001 protein_coding Mus_musculus 1e-30 139
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 2e-24 119
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 2e-24 119
ENSMUST00000109914 Zfp345-001 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000109922 Gm14124-001 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000109929 Gm14139-201 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000109926 Gm14139-001 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000054072 Zfp81-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000147630 Zfp97-001 protein_coding Mus_musculus 0.00000000004 75
ENSMUST00000127027 Zfp960-001 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000060063 Zfp846-201 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000140668 Zfp846-001 nonsense_mediated_decay Mus_musculus 0.0000000005 71
ENSMUST00000115557 Zfp846-002 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000080987 Zfp869-201 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000049705 Zfp457-201 protein_coding Mus_musculus 0.00000008 64
ENSMUST00000076281 Zfp781-201 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000105316 Gm3055-201 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0.000001 60

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