C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 616
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600228 ZNF616-001 ENSG00000204611 9606 - 19:52113091-52139917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000600228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000600228 0.960±0.00 0.451±0.00 0.237±0.00 0.451±0.20 0.599±0.08 0.810±0.20 0.435±0.01 1.114±0.33 1.083±0.00 1.481±0.00 0.219±0.00 1.099±1.01 0.534±0.24 0.839±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AO CIL_0003AO_0003 CGP 19:52064466-52139922
CIL_0004WQ CIL_0004WQ_0002 CGP 19:52113091-52171643

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088811 Zfp160-201 protein_coding Mus_musculus 0 473
ENSMUST00000148762 Gm13151-001 protein_coding Mus_musculus 0 429
ENSMUST00000146688 Gm13150-001 protein_coding Mus_musculus 0 418
ENSMUST00000091878 Gm13051-002 protein_coding Mus_musculus 0 416
ENSMUST00000105727 Gm8935-001 transcribed_processed_pseudogene Mus_musculus 0 411
ENSMUST00000066794 Gm8935-002 processed_transcript Mus_musculus 0 411
ENSMUST00000183129 Gm26996-001 unprocessed_pseudogene Mus_musculus 0 309
ENSMUST00000179175 Gm13247-201 protein_coding Mus_musculus 0 302
ENSMUST00000105735 Gm13247-001 protein_coding Mus_musculus 0 302
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 0 289
ENSMUST00000189515 RP24-229N16.1-001 unprocessed_pseudogene Mus_musculus 0 283
ENSMUST00000182397 Gm20997-001 unprocessed_pseudogene Mus_musculus 0 265
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 0 263
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 0 263
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 0 263
ENSMUST00000182643 Gm26919-001 protein_coding Mus_musculus 0 248
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0 230
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 0 209
ENSMUST00000080249 Zfp947-001 protein_coding Mus_musculus 0 206
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 206
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 206
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0 191
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 2e-40 172
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 2e-40 172
ENSMUST00000074295 Zfp942-201 protein_coding Mus_musculus 8e-40 171
ENSMUST00000091879 Zfp942-001 protein_coding Mus_musculus 8e-40 171
ENSMUST00000108007 Gm20939-201 protein_coding Mus_musculus 2e-36 159
ENSMUST00000039726 3110052M02Rik-201 protein_coding Mus_musculus 2e-30 139
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 1e-28 134
ENSMUST00000167740 Zfp946-201 protein_coding Mus_musculus 4e-28 132
ENSMUST00000088763 Zfp946-002 protein_coding Mus_musculus 4e-28 132
ENSMUST00000120222 Zfp946-001 protein_coding Mus_musculus 4e-28 132
ENSMUST00000065871 Zfp229-201 protein_coding Mus_musculus 1e-27 130
ENSMUST00000182603 Zfp229-001 protein_coding Mus_musculus 1e-27 130
ENSMUST00000190869 RP23-293C19.1-001 unprocessed_pseudogene Mus_musculus 1e-23 117
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 5e-22 111
ENSMUST00000191265 RP23-133G16.2-001 protein_coding Mus_musculus 3e-19 102
ENSMUST00000078257 D130040H23Rik-201 protein_coding Mus_musculus 4e-18 99
ENSMUST00000189430 RP23-113N18.2-001 unprocessed_pseudogene Mus_musculus 1e-17 97
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 5e-17 95
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 5e-17 95
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 5e-17 95
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 5e-17 95
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 5e-17 95
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 5e-17 95
ENSMUST00000182441 Gm27013-001 unprocessed_pseudogene Mus_musculus 0.000000000000002 90
ENSMUST00000019572 Zfp874b-001 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000007884 Zfp54-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000165230 Zfp54-002 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000097384 Gm10509-201 protein_coding Mus_musculus 0.00000000006 75
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000122407 Gm12591-001 unprocessed_pseudogene Mus_musculus 0.00000004 66
ENSMUST00000186341 RP23-113N18.3-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000165705 Zfp583-201 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000108560 Zfp583-002 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000062765 Zfp583-001 protein_coding Mus_musculus 0.0000005 62

Loading