C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601390 RPS16-002 ENSG00000105193 9606 - 19:39433223-39435948 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungOvaryTestisENST00000601390
Transcript ID Bladder Breast Colon Lung Ovary Testis
ENST00000601390 0.746±0.00 1.663±0.00 1.566±0.00 1.111±0.00 6.924±5.67 1.903±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155805 Rps16-003 processed_transcript Mus_musculus 0 374
ENSMUST00000082134 Rps16-001 protein_coding Mus_musculus 0 374
ENSMUST00000152918 Rps16-002 retained_intron Mus_musculus 0 263
ENSMUST00000179126 Rps16-ps3-201 processed_pseudogene Mus_musculus 1.99965e-42 178
ENSMUST00000106107 Rab40b-001 protein_coding Mus_musculus 0.0000000001 73

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