C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602783 PPFIA3-009 ENSG00000177380 9606 + 19:49149958-49151021 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000602783
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000602783 1.205±0.00 3.749±0.00 1.016±0.00 1.977±0.00 4.258±0.00 0.907±0.00 1.434±0.61 1.471±0.00 4.235±3.98 2.316±0.15 4.842±1.71 3.062±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151970 Ppfia3-005 processed_transcript Mus_musculus 0 575
ENSMUST00000003961 Ppfia3-201 protein_coding Mus_musculus 0 531
ENSMUST00000137578 Ppfia3-003 protein_coding Mus_musculus 0 531
ENSMUST00000131154 Ppfia3-002 retained_intron Mus_musculus 0 531
ENSMUST00000130143 Ppfia3-004 processed_transcript Mus_musculus 0 531
ENSMUST00000107779 Ppfia3-001 protein_coding Mus_musculus 0 531

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