C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603335 RP11-1E1.2-001 ENSG00000271676 9606 - 4:77112495-77113458 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartMuscleOvaryTestisENST00000603335
Transcript ID Adipose Adrenal Breast Heart Muscle Ovary Testis
ENST00000603335 0.037±0.00 0.081±0.00 0.042±0.00 0.020±0.00 0.018±0.00 0.036±0.01 0.153±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0001 VISTA 4:76511627-77112790
CIL_0008OK CIL_0008OK_0001 VISTA 4:76686015-77293072

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033158 Ubfd1-001 protein_coding Mus_musculus 0 998
ENSMUST00000133390 Ubfd1-003 retained_intron Mus_musculus 0 582
ENSMUST00000148060 Ubfd1-002 retained_intron Mus_musculus 0 564
ENSMUST00000124733 Ubfd1-004 processed_transcript Mus_musculus 0 508
ENSMUST00000153640 Ubfd1-005 processed_transcript Mus_musculus 0 261

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