C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin family domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153640 Ubfd1-005 ENSMUSG00000030870 10090 + 7:122068899-122078611 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000153640
Transcript ID Placenta Testis
ENSMUST00000153640 78.162±4.37 6.767±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D4 CIL_0006D4_0002 CGP 7:121986722-122067263
CIL_0006D3 CIL_0006D3_0002 CGP 7:122037213-122082194
CIL_0006D2 CIL_0006D2_0002 CGP 7:122067175-122101886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395878 UBFD1-001 protein_coding Homo_sapiens 0 429
ENST00000563366 UBFD1-006 processed_transcript Homo_sapiens 0 429
ENST00000564106 UBFD1-008 processed_transcript Homo_sapiens 0 425
ENST00000565634 UBFD1-007 retained_intron Homo_sapiens 0 311
ENST00000566136 UBFD1-003 retained_intron Homo_sapiens 0 429
ENST00000567212 UBFD1-002 protein_coding Homo_sapiens 0 429
ENST00000603335 RP11-1E1.2-001 processed_pseudogene Homo_sapiens 0 261

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