C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603662 RP11-130N24.2-001 ENSG00000271589 9606 + X:74769639-74769798 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000603662
Transcript ID Muscle Testis
ENST00000603662 0.081±0.00 0.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S6 CIL_0006S6_0001 CGP X:74585217-74925485
CIL_000121 CIL_000121_0001 CGP X:74732849-75156732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189836 Lrrc28-011 protein_coding Mus_musculus 0 207
ENSMUST00000032775 Lrrc28-002 protein_coding Mus_musculus 0 207
ENSMUST00000190276 Lrrc28-007 protein_coding Mus_musculus 0 207
ENSMUST00000191035 Lrrc28-005 nonsense_mediated_decay Mus_musculus 0 207
ENSMUST00000187953 Lrrc28-003 nonsense_mediated_decay Mus_musculus 0 207
ENSMUST00000053950 Lrrc28-001 protein_coding Mus_musculus 0 207

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