C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000606284 CTD-2501B8.5-001 ENSG00000228979 9606 + 17:63471604-63472093 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000606284
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000606284 0.093±0.00 0.327±0.00 0.139±0.00 0.431±0.00 0.121±0.00 0.029±0.00 0.228±0.00 0.292±0.15 0.031±0.00 0.056±0.00 0.120±0.02 0.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZU CIL_0006ZU_0001 CGP 17:63432304-63498380

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 603
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 586
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 584
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 580
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 564
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 556
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 518
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000120045 Gm14534-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 4.06377e-44 182

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