C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XXV, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610288 COL25A1-201 ENSG00000188517 9606 - 4:108810721-109050182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverLungPlacentaENST00000610288
Transcript ID Heart Liver Lung Placenta
ENST00000610288 0.009±0.00 0.016±0.00 0.114±0.00 0.041±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000872 CIL_000872_0001 VISTA 4:108310752-108912309
CIL_0008PU CIL_0008PU_0001 VISTA 4:108672054-109274138

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183368 Col25a1-004 nonsense_mediated_decay Mus_musculus 0 2222
ENSMUST00000080335 Col25a1-002 protein_coding Mus_musculus 0 1507
ENSMUST00000143830 Col25a1-003 retained_intron Mus_musculus 0 865
ENSMUST00000106353 Col25a1-001 protein_coding Mus_musculus 0 628

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