C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610498 NFKB2-202 ENSG00000077150 9606 + 10:102395706-102399215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENST00000610498
Transcript ID Brain Breast Ovary Placenta Testis
ENST00000610498 0.746±0.61 2.334±0.00 5.771±4.91 4.683±0.00 1.692±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WJ CIL_0005WJ_0001 CGP 10:102245532-102402529
CIL_0001HR CIL_0001HR_0002 CGP 10:102394110-102421539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111881 Nfkb2-202 protein_coding Mus_musculus 0 1421
ENSMUST00000073116 Nfkb2-201 protein_coding Mus_musculus 0 1419

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