C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroligin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612180 NLGN3-202 ENSG00000196338 9606 + X:71144831-71171199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENST00000612180
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENST00000612180 5.178±0.00 1.466±0.00 0.068±0.00 0.765±0.00 0.226±0.13 3.176±2.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057X CIL_00057X_0001 CGP X:71118556-71171201
CIL_00057N CIL_00057N_0001 CGP X:71144831-71225516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065858 Nlgn3-001 protein_coding Mus_musculus 0 4855
ENSMUST00000118111 Nlgn3-002 protein_coding Mus_musculus 0 3989
ENSMUST00000151528 Nlgn3-004 protein_coding Mus_musculus 0 3779
ENSMUST00000130555 Nlgn3-003 protein_coding Mus_musculus 0 1580
ENSDART00000125284 nlgn2a-202 protein_coding Danio_rerio 0 582
ENSMUST00000144860 Nlgn3-007 processed_transcript Mus_musculus 0 555
ENSDART00000112978 nlgn2a-201 protein_coding Danio_rerio 0 538
ENSMUST00000147443 Nlgn3-006 processed_transcript Mus_musculus 0 374

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