C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612396 LARP4B-201 ENSG00000107929 9606 - 10:806914-931705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverMuscleOvaryENST00000612396
Transcript ID Bladder Brain Colon Liver Muscle Ovary
ENST00000612396 0.389±0.00 1.098±0.00 0.696±0.00 0.502±0.00 0.694±0.00 1.315±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0010494 IDA cytoplasmic stress granule
GO:0016020 IDA membrane
GO:0042788 IDA polysomal ribosome
GO:0044822 IDA poly(A) RNA binding
GO:0045727 IMP positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188211 Larp4b-001 protein_coding Mus_musculus 0 2867
ENSMUST00000188939 Larp4b-003 protein_coding Mus_musculus 0 2407
ENSMUST00000091829 Larp4b-002 protein_coding Mus_musculus 0 1692
ENSMUST00000189330 Larp4b-005 retained_intron Mus_musculus 0 821
ENSMUST00000190041 Larp4b-008 protein_coding Mus_musculus 0 268

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