C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 1, type 1, E-cadherin (epithelial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612417 CDH1-202 ENSG00000039068 9606 + 16:68737292-68834281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000612417
Transcript ID Muscle
ENST00000612417 0.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y9 CIL_0004Y9_0003 CGP 16:68636189-68835548
CIL_0004RG CIL_0004RG_0001 CGP 16:68737225-69085180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167688 Cdh1-201 protein_coding Mus_musculus 0 1277
ENSMUST00000000312 Cdh1-001 protein_coding Mus_musculus 0 1277

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