C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cytokine signaling 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612932 SOCS7-001 ENSG00000274211 9606 + 17:38352245-38405593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleTestisENST00000612932
Transcript ID Brain Colon Heart Muscle Testis
ENST00000612932 3.953±0.03 1.004±0.00 0.601±0.38 0.953±0.04 14.307±3.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TL CIL_0000TL_0002 CGP 17:38325530-38405593
CIL_0000SJ CIL_0000SJ_0001 CGP 17:38352228-38512392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0008286 IEA insulin receptor signaling pathway
GO:0009968 IEA negative regulation of signal transduction
GO:0016567 IEA protein ubiquitination
GO:0017124 NAS SH3 domain binding
GO:0035556 IEA intracellular signal transduction
GO:0040008 IEA regulation of growth
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045444 IEA fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045540 Socs7-001 protein_coding Mus_musculus 0 2527
ENSMUST00000149212 Socs7-002 processed_transcript Mus_musculus 0 348
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.00001 58

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