C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612954 PCDH17-004 ENSG00000118946 9606 + 13:57634383-57725293 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENST00000612954
Transcript ID Muscle Ovary Placenta
ENST00000612954 0.043±0.00 0.489±0.00 2.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MF CIL_0000MF_0001 CGP 13:57631810-60163987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071370 Pcdh17-201 protein_coding Mus_musculus 0 2388

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