C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP16 nucleolar protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613081 NOP16-201 ENSG00000048162 9606 - 5:176383947-176388927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000613081
Transcript ID Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000613081 5.652±4.69 0.613±0.00 6.807±4.70 12.804±0.00 0.971±0.00 9.792±8.32 7.294±0.00 9.940±6.41 4.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DL CIL_0002DL_0001 CGP 5:176346061-176401865
CIL_00098R CIL_00098R_0001 VISTA 5:176349731-176951529
CIL_0000P0 CIL_0000P0_0002 CGP 5:176365468-176401865
CIL_0002N9 CIL_0002N9_0001 CGP 5:176383938-176389771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026987 Nop16-001 protein_coding Mus_musculus 0 652
ENSMUST00000148222 Nop16-003 protein_coding Mus_musculus 0 636
ENSMUST00000149462 Nop16-002 nonsense_mediated_decay Mus_musculus 4e-32 143

Loading