C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: T-box 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613550 TBX3-201 ENSG00000135111 9606 - 12:114671841-114683461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungENST00000613550
Transcript ID Brain Heart Lung
ENST00000613550 0.267±0.00 0.251±0.00 6.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095S CIL_00095S_0001 VISTA 12:114119731-114721669
CIL_00092A CIL_00092A_0001 VISTA 12:114147407-114748589
CIL_0008K6 CIL_0008K6_0001 VISTA 12:114385728-114986369
CIL_0008K7 CIL_0008K7_0001 VISTA 12:114386589-114987495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079719 Tbx3-201 protein_coding Mus_musculus 0 2289
ENSMUST00000121021 Tbx3-002 protein_coding Mus_musculus 0 2289
ENSMUST00000018748 Tbx3-001 protein_coding Mus_musculus 0 1391
ENSMUST00000018407 Tbx5-201 protein_coding Mus_musculus 0.00000007 64

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