C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613854 HIST1H3A-001 ENSG00000275714 9606 + 6:26020490-26020900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000613854
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000613854 0.242±0.00 0.651±0.00 1.426±0.00 5.135±0.00 2.025±0.00 0.578±0.18 0.805±0.73 1.573±0.00 1.531±2.33 1.244±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0060968 IDA regulation of gene silencing
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091752 Hist1h3c-001 protein_coding Mus_musculus 0 481
ENSMUST00000091703 Hist1h3b-001 protein_coding Mus_musculus 0 464
ENSDART00000157370 hist2h3c-001 protein_coding Danio_rerio 0 388
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 350
ENSDART00000098982 protein_coding Danio_rerio 0 320
ENSDART00000151594 protein_coding Danio_rerio 0 320

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