C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000157370 hist2h3c-001 ENSDARG00000097785 7955 - 25:36200412-36200822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000157370
Transcript ID Heart Kidney
ENSDART00000157370 0.485±0.00 0.725±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0030246 IEA carbohydrate binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016703 H3f3b-201 protein_coding Mus_musculus 0 283
ENSMUST00000106454 H3f3b-001 protein_coding Mus_musculus 0 283
ENSMUST00000139623 H3f3b-002 processed_transcript Mus_musculus 0 207
ENSMUST00000160676 Gm6485-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000188775 Hist1h3h-001 protein_coding Mus_musculus 0 444
ENST00000254810 H3F3B-001 protein_coding Homo_sapiens 0 327
ENST00000340398 H3F3C-001 protein_coding Homo_sapiens 0 307
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 364
ENST00000586270 H3F3B-006 protein_coding Homo_sapiens 0 315
ENST00000586518 H3F3B-012 retained_intron Homo_sapiens 8e-31 139
ENST00000586607 H3F3B-003 protein_coding Homo_sapiens 0 327
ENST00000587560 H3F3B-007 protein_coding Homo_sapiens 0 327
ENST00000589599 H3F3B-005 protein_coding Homo_sapiens 0 327
ENST00000589949 H3F3B-008 retained_intron Homo_sapiens 4e-31 139
ENST00000591890 H3F3B-011 protein_coding Homo_sapiens 0 294
ENST00000592643 H3F3B-010 protein_coding Homo_sapiens 1e-30 137
ENST00000593254 H3F3B-002 processed_transcript Homo_sapiens 9e-38 161
ENST00000613854 HIST1H3A-001 protein_coding Homo_sapiens 0 388

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