C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091752 Hist1h3c-001 ENSMUSG00000069310 10090 - 13:23745013-23745501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091752 1.874±1.71 1.420±0.40 0.436±0.18 16.158±1.78 2.137±1.12 4.978±1.20 0.153±0.04 0.417±0.20 18.320±20.01 0.718±0.34 0.238±0.00 6.636±4.34 8.495±9.51 0.741±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005654 ISS nucleoplasm
GO:0046982 IEA protein heterodimerization activity
GO:0060968 ISS regulation of gene silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 466
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 462
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 460
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 455
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 455
ENSDART00000089844 protein_coding Danio_rerio 0 453
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 453
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 449
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 449
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 438
ENSDART00000136456 protein_coding Danio_rerio 0 438
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 438
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 433
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 427
ENSDART00000151600 protein_coding Danio_rerio 0 370
ENSDART00000093030 protein_coding Danio_rerio 0 361
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 488
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 481
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 492
ENST00000613854 HIST1H3A-001 protein_coding Homo_sapiens 0 481
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 453
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 466

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